Detailed information of evm.model.Chr04.904 in Hemicorallium imperiale

Genomic Location: Chr04:19277598...19286912
NR annotation: CAB4008315.1, Hypothetical predicted protein, partial [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr04.904 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7TQH0Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1
Q8WWM7Ataxin-2-like protein OS=Homo sapiens OX=9606 GN=ATXN2L PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010789 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14438
all species →		SM-ATXAtaxin 2 SM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025852
all species →		DomainAtaxin 2, SM domainInterproscan
IPR045117
all species →		FamilyAtaxin2-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12854
all species →		ATAXIN 2-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0003729
all species →		Molecular FunctionmRNA bindingInterproscan
GO:0010494
all species →		Cellular Componentcytoplasmic stress granuleInterproscan
GO:0034063
all species →		Biological Processstress granule assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06182rluF; 23S rRNA pseudouridine2604 synthaseEC:5.4.99.21
Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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