Detailed information of evm.model.Chr04.938 in Hemicorallium imperiale

Genomic Location: Chr04:19799054...19823406
NR annotation: XP_046839562.1, uncharacterized protein LOC124433815 [Xenia sp. Carnegie-2017]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr04.938 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q60974Nuclear receptor corepressor 1 OS=Mus musculus OX=10090 GN=Ncor1 PE=1 SV=1
O75376Nuclear receptor corepressor 1 OS=Homo sapiens OX=9606 GN=NCOR1 PE=1 SV=2
Q9WU42Nuclear receptor corepressor 2 OS=Mus musculus OX=10090 GN=Ncor2 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002923 (this species only)
Transcription factor familyMYB · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00249
all species →		Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan
PF15784
all species →		GPS2_interactG-protein pathway suppressor 2-interacting domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051571
all species →		FamilyNuclear receptor corepressorInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001005
all species →		DomainSANT/Myb domainInterproscan
IPR017884
all species →		DomainSANT domainInterproscan
IPR017930
all species →		DomainMyb domainInterproscan
IPR031557
all species →		DomainN-CoR, GPS2-interacting domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13992
all species →		NUCLEAR RECEPTOR CO-REPRESSOR RELATED NCORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000790
all species →		Cellular ComponentchromatinInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr04.938.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP