Gene detail

Detailed information of evm.model.Chr05.1002 in Hemicorallium imperiale

Genomic Location: Chr05:17076303...17079509
NR annotation: CAB4027307.1, E3 ubiquitin- ligase DZIP3 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P25941	Regulatory protein AfsR OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) OX=100226 GN=afsR PE=1 SV=2
Q9S0Y6	Regulatory protein AfsR OS=Streptomyces griseus OX=1911 GN=afsR PE=1 SV=1
Q8YTC2	Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=alr2800 PE=4 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15112	DUF4559	Domain of unknown function (DUF4559)	Family	Interproscan
PF00931	NB-ARC	NB-ARC domain	Domain	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR027897	Family	Protein of unknown function DUF4559	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR002182	Domain	NB-ARC	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47691	REGULATOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0043531	Molecular Function	ADP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19360	NPHP3; nephrocystin-3	-	Cilium and associated proteins	ko03037	deepkoala