Detailed information of evm.model.Chr05.1067 in Hemicorallium imperiale

Genomic Location: Chr05:17845741...17849981
NR annotation: CAB4025119.1, Syntaxin-18 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr05.1067 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5REB4Syntaxin-18 OS=Pongo abelii OX=9601 GN=STX18 PE=2 SV=1
Q9P2W9Syntaxin-18 OS=Homo sapiens OX=9606 GN=STX18 PE=1 SV=1
Q8VDS8Syntaxin-18 OS=Mus musculus OX=10090 GN=Stx18 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005970 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10496
all species →		Syntaxin-18_NSNARE-complex protein Syntaxin-18 N-terminus DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019529
all species →		DomainSNARE-complex protein Syntaxin-18, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15959
all species →		SYNTAXIN-18Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan
GO:0006890
all species →		Biological Processretrograde vesicle-mediated transport, Golgi to endoplasmic reticulumInterproscan
GO:0031201
all species →		Cellular ComponentSNARE complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr05.1067.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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