Detailed information of evm.model.Chr05.1069 in Hemicorallium imperiale

Genomic Location: Chr05:17867417...17885520
NR annotation: XP_028391025.1, LOW QUALITY PROTEIN: DNA topoisomerase 2-binding protein 1-A-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr05.1069 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q800K6DNA topoisomerase 2-binding protein 1-A OS=Xenopus laevis OX=8355 GN=topbp1-A PE=1 SV=2
Q6ZQF0DNA topoisomerase 2-binding protein 1 OS=Mus musculus OX=10090 GN=Topbp1 PE=1 SV=2
Q92547DNA topoisomerase 2-binding protein 1 OS=Homo sapiens OX=9606 GN=TOPBP1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004195 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21298
all species →		TopBP1_BRCT0TopBP1, BRCT0 domainDomainInterproscan
PF00533
all species →		BRCTBRCA1 C Terminus (BRCT) domainFamilyInterproscan
PF12738
all species →		PTCB-BRCTtwin BRCT domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036420
all species →		Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR001357
all species →		DomainBRCT domainInterproscan
IPR049542
all species →		DomainDNA topoisomerase 2-binding protein 1-like, BRCT0 domainInterproscan
IPR049936
all species →		DomainDNA topoisomerase 2-binding protein 1, eighth BRCT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13561
all species →		DNA REPLICATION REGULATOR DPB11-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006270
all species →		Biological ProcessDNA replication initiationInterproscan
GO:0007095
all species →		Biological Processmitotic G2 DNA damage checkpoint signalingInterproscan
GO:0033314
all species →		Biological Processmitotic DNA replication checkpoint signalingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10728TOPBP1; topoisomerase (DNA) II binding protein 1-DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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