Detailed information of evm.model.Chr05.1079 in Hemicorallium imperiale

Genomic Location: Chr05:18040337...18047509
NR annotation: XP_028391070.1, ubiquitin thioesterase ZRANB1-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr05.1079 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A6QP16Ubiquitin thioesterase ZRANB1 OS=Bos taurus OX=9913 GN=ZRANB1 PE=1 SV=1
Q7M760Ubiquitin thioesterase Zranb1 OS=Mus musculus OX=10090 GN=Zranb1 PE=2 SV=1
Q9UGI0Ubiquitin thioesterase ZRANB1 OS=Homo sapiens OX=9606 GN=ZRANB1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009098 (this species only)
Ubiquitin familyUBD|ZnF|NZF · all ubiquitin genes in this species
Ubiquitin familyDUB|OTU|OTU · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02338
all species →		OTUOTU-like cysteine proteaseFamilyInterproscan
PF00641
all species →		zf-RanBPZn-finger in Ran binding protein and othersDomainInterproscan
PF18418
all species →		AnkUBDAnkyrin ubiquitin-binding domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036443
all species →		Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan
IPR003323
all species →		DomainOTU domainInterproscan
IPR001876
all species →		DomainZinc finger, RanBP2-typeInterproscan
IPR049768
all species →		DomainUbiquitin thioesterase ZRANB1, ovarian tumor domainInterproscan
IPR041294
all species →		DomainAnkyrin ubiquitin-binding domainInterproscan
IPR051346
all species →		FamilyOTU Domain-Containing DeubiquitinaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13367
all species →		UBIQUITIN THIOESTERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004843
all species →		Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0070530
all species →		Molecular FunctionK63-linked polyubiquitin modification-dependent protein bindingInterproscan
GO:0071947
all species →		Biological Processprotein deubiquitination involved in ubiquitin-dependent protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11862ZRANB1, TRABID; ubiquitin thioesterase ZRANB1EC:3.4.19.12
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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