Genomic Location: Chr05:21295944...21418920
NR annotation: XP_028410485.1, E3 ubiquitin-protein ligase CHFR-like [Dendronephthya gigantea]
Species abbreviation HIMPE · all data for this species · gene families
evm.model.Chr05.1226 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| A5WW08 | E3 ubiquitin-protein ligase CHFR OS=Danio rerio OX=7955 GN=chfr PE=2 SV=1 |
| Q6P256 | E3 ubiquitin-protein ligase CHFR OS=Xenopus tropicalis OX=8364 GN=chfr PE=2 SV=1 |
| Q5FWP4 | E3 ubiquitin-protein ligase CHFR OS=Xenopus laevis OX=8355 GN=chfr PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004999 (this species only) |
| Ubiquitin family | E3|E3 activity|HECT · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF17979 all species → | zf-CRD | Cysteine rich domain with multizinc binding regions | Domain | Interproscan |
| PF13923 all species → | zf-C3HC4_2 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| PF00498 all species → | FHA | FHA domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000253 all species → | Domain | Forkhead-associated (FHA) domain | Interproscan |
| IPR040909 all species → | Domain | E3 ubiquitin-protein ligase CHFR, cysteine rich domain with multizinc binding | Interproscan |
| IPR001841 all species → | Domain | Zinc finger, RING-type | Interproscan |
| IPR052256 all species → | Family | E3 ubiquitin-protein ligase CHFR | Interproscan |
| IPR008984 all species → | Homologous_superfamily | SMAD/FHA domain superfamily | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR035983 all species → | Homologous_superfamily | HECT, E3 ligase catalytic domain | Interproscan |
| IPR000569 all species → | Domain | HECT domain | Interproscan |
| IPR017907 all species → | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR16079 all species → | UBIQUITIN LIGASE PROTEIN CHFR | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0004842 all species → | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006511 all species → | Biological Process | ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0007093 all species → | Biological Process | mitotic cell cycle checkpoint signaling | Interproscan |
| GO:0016567 all species → | Biological Process | protein ubiquitination | Interproscan |
evm.model.Chr05.1226.
