Detailed information of evm.model.Chr05.569 in Hemicorallium imperiale

Genomic Location: Chr05:10597570...10636961
NR annotation: CAB4035419.1, lysyl oxidase homolog 2A-like, partial [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr05.569 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A1L1V4Lysyl oxidase homolog 2B OS=Danio rerio OX=7955 GN=loxl2b PE=2 SV=1
Q8MJ24Lysyl oxidase homolog 4 OS=Bos taurus OX=9913 GN=LOXL4 PE=2 SV=1
P58022Lysyl oxidase homolog 2 OS=Mus musculus OX=10090 GN=Loxl2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001610 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05649
all species →		Peptidase_M13_NPeptidase family M13FamilyInterproscan
PF00530
all species →		SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF01186
all species →		Lysyl_oxidaseLysyl oxidase FamilyInterproscan
PF01431
all species →		Peptidase_M13Peptidase family M13FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001695
all species →		FamilyLysyl oxidaseInterproscan
IPR000718
all species →		FamilyPeptidase M13Interproscan
IPR036772
all species →		Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR024079
all species →		Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR001190
all species →		DomainSRCR domainInterproscan
IPR050912
all species →		FamilyLysyl oxidase-like proteinInterproscan
IPR008753
all species →		DomainPeptidase M13, N-terminal domainInterproscan
IPR042089
all species →		Homologous_superfamilyPeptidase M13, domain 2Interproscan
IPR018497
all species →		DomainPeptidase M13, C-terminal domainInterproscan
IPR017448
all species →		DomainSRCR-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45817
all species →		LYSYL OXIDASE-LIKE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005507
all species →		Molecular Functioncopper ion bindingInterproscan
GO:0016641
all species →		Molecular Functionoxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptorInterproscan
GO:0004222
all species →		Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0008237
all species →		Molecular Functionmetallopeptidase activityInterproscan
GO:0004720
all species →		Molecular Functionprotein-lysine 6-oxidase activityInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan
GO:0018057
all species →		Biological Processpeptidyl-lysine oxidationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr05.569.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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