Detailed information of evm.model.Chr05.589 in Hemicorallium imperiale

Genomic Location: Chr05:11036346...11041208
NR annotation: XP_046851684.1, tetratricopeptide repeat protein 1-like [Xenia sp. Carnegie-2017]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr05.589 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3ZBR5Tetratricopeptide repeat protein 1 OS=Bos taurus OX=9913 GN=TTC1 PE=2 SV=1
Q91Z38Tetratricopeptide repeat protein 1 OS=Mus musculus OX=10090 GN=Ttc1 PE=1 SV=1
Q99614Tetratricopeptide repeat protein 1 OS=Homo sapiens OX=9606 GN=TTC1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006930 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14559
all species →		TPR_19Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR052769
all species →		FamilyTetratricopeptide repeat domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46014
all species →		TETRATRICOPEPTIDE REPEAT PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24926TTC1; tetratricopeptide repeat protein 1-Chaperones and folding catalystsko03110deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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