Gene detail

Detailed information of evm.model.Chr05.603 in Hemicorallium imperiale

Genomic Location: Chr05:11662640...11684175
NR annotation: CAB3976817.1, Hypothetical predicted protein [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5R8W8	Small ribosomal subunit protein mS39 OS=Pongo abelii OX=9601 GN=PTCD3 PE=2 SV=1
Q14C51	Small ribosomal subunit protein mS39 OS=Mus musculus OX=10090 GN=Ptcd3 PE=1 SV=2
Q2KI62	Small ribosomal subunit protein mS39 OS=Bos taurus OX=9913 GN=PTCD3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17177	PPR_long	Pentacotripeptide-repeat region of PRORP	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033443	Domain	Pentacotripeptide-repeat region of PRORP	Interproscan
IPR037387	Family	Pentatricopeptide repeat domain-containing protein 3	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16276	PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0019843	Molecular Function	rRNA binding	Interproscan
GO:0032543	Biological Process	mitochondrial translation	Interproscan
GO:0043024	Molecular Function	ribosomal small subunit binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17659	PTCD3; pentatricopeptide repeat domain-containing protein 3	-	Mitochondrial biogenesis	ko03029	deepkoala