Gene detail

Detailed information of evm.model.Chr05.625 in Hemicorallium imperiale

Genomic Location: Chr05:11960250...11961952
NR annotation: XP_028391156.1, protein phosphatase 1 regulatory subunit 3B-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr05.625 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7TMB3	Protein phosphatase 1 regulatory subunit 3C OS=Mus musculus OX=10090 GN=Ppp1r3c PE=1 SV=1
Q0VCR4	Protein phosphatase 1 regulatory subunit 3C OS=Bos taurus OX=9913 GN=PPP1R3C PE=2 SV=1
O95685	Protein phosphatase 1 regulatory subunit 3D OS=Homo sapiens OX=9606 GN=PPP1R3D PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000769 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03370 all species →	CBM_21	Carbohydrate/starch-binding module (family 21)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038175 all species →	Homologous_superfamily	CBM21 domain superfamily	Interproscan
IPR005036 all species →	Domain	CBM21 (carbohydrate binding type-21) domain	Interproscan
IPR050782 all species →	Family	Protein phosphatase 1 regulatory subunit 3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12307 all species →	PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000164 all species →	Cellular Component	protein phosphatase type 1 complex	Interproscan
GO:0005979 all species →	Biological Process	regulation of glycogen biosynthetic process	Interproscan
GO:0008157 all species →	Molecular Function	protein phosphatase 1 binding	Interproscan
GO:2001069 all species →	Molecular Function	glycogen binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07189	PPP1R3; protein phosphatase 1 regulatory subunit 3A/B/C/D/E	-	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.