Detailed information of evm.model.Chr05.630 in Hemicorallium imperiale

Genomic Location: Chr05:12005940...12014541
NR annotation: CAB3991004.1, farnesyltransferase geranylgeranyltransferase type-1 subunit alpha [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr05.630 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q04631Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Fnta PE=1 SV=1
Q61239Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Mus musculus OX=10090 GN=Fnta PE=1 SV=1
P29702Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Bos taurus OX=9913 GN=FNTA PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007057 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01239
all species →		PPTAProtein prenyltransferase alpha subunit repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002088
all species →		RepeatProtein prenyltransferase, alpha subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11129
all species →		PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004660
all species →		Molecular Functionprotein farnesyltransferase activityInterproscan
GO:0004662
all species →		Molecular FunctionCAAX-protein geranylgeranyltransferase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005953
all species →		Cellular ComponentCAAX-protein geranylgeranyltransferase complexInterproscan
GO:0005965
all species →		Cellular Componentprotein farnesyltransferase complexInterproscan
GO:0018343
all species →		Biological Processprotein farnesylationInterproscan
GO:0018344
all species →		Biological Processprotein geranylgeranylationInterproscan
GO:0008318
all species →		Molecular Functionprotein prenyltransferase activityInterproscan
GO:0018342
all species →		Biological Processprotein prenylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K05955FNTA; protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alphaEC:2.5.1.58
EC:2.5.1.59
Prenyltransferasesko01006deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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