Detailed information of evm.model.Chr05.723 in Hemicorallium imperiale

Genomic Location: Chr05:13461289...13470236
NR annotation: CAB4030728.1, Peptide chain release factor 1 [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr05.723 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B3CL87Peptide chain release factor 1 OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) OX=570417 GN=prfA PE=3 SV=1
Q2GE03Peptide chain release factor 1 OS=Neorickettsia sennetsu (strain ATCC VR-367 / Miyayama) OX=222891 GN=prfA PE=3 SV=1
Q2KI15Peptide chain release factor 1-like, mitochondrial OS=Bos taurus OX=9913 GN=MTRF1L PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002637 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03462
all species →		PCRFPCRF domainDomainInterproscan
PF00472
all species →		RF-1RF-1 domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005139
all species →		DomainPeptide chain release factorInterproscan
IPR045853
all species →		Homologous_superfamilyPeptide chain release factor class I superfamilyInterproscan
IPR000352
all species →		DomainPeptide chain release factor class IInterproscan
IPR050057
all species →		FamilyProkaryotic/Mitochondrial Release FactorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43804
all species →		LD18447PInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006415
all species →		Biological Processtranslational terminationInterproscan
GO:0003747
all species →		Molecular Functiontranslation release factor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02835prfA, MTRF1, MRF1; peptide chain release factor 1-Translation factorsko03012deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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