Gene detail

Detailed information of evm.model.Chr05.747 in Hemicorallium imperiale

Genomic Location: Chr05:13749054...13751526
NR annotation: CAB3990713.1, Hypothetical predicted protein [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr05.747 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5R596	Polyadenylate-binding protein-interacting protein 2 OS=Pongo abelii OX=9601 GN=PAIP2 PE=2 SV=1
Q5ZJS6	Polyadenylate-binding protein-interacting protein 2 OS=Gallus gallus OX=9031 GN=PAIP2 PE=2 SV=1
Q3ZC67	Polyadenylate-binding protein-interacting protein 2 OS=Bos taurus OX=9913 GN=PAIP2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009031 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07145 all species →	PAM2	Ataxin-2 C-terminal region	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040396 all species →	Family	Polyadenylate-binding protein-interacting protein 2-like	Interproscan
IPR009818 all species →	Domain	Ataxin-2, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13154 all species →	POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000900 all species →	Molecular Function	mRNA regulatory element binding translation repressor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0017148 all species →	Biological Process	negative regulation of translation	Interproscan
GO:0030371 all species →	Molecular Function	translation repressor activity	Interproscan
GO:0045947 all species →	Biological Process	negative regulation of translational initiation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K27470	PAIP2; polyadenylate-binding protein-interacting protein 2	-	Messenger RNA biogenesis	ko03019	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.