Detailed information of evm.model.Chr05.756 in Hemicorallium imperiale

Genomic Location: Chr05:13830849...13840034
NR annotation: XP_028414975.1, probable ATP-dependent RNA helicase DDX58 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6Q899Antiviral innate immune response receptor RIG-I OS=Mus musculus OX=10090 GN=Rigi PE=1 SV=2
Q8R5F7Interferon-induced helicase C domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ifih1 PE=1 SV=1
O95786Antiviral innate immune response receptor RIG-I OS=Homo sapiens OX=9606 GN=RIGI PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11648RIG-I_C-RDC-terminal domain of RIG-IDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF18119RIG-I_CRIG-I receptor C-terminal domainDomainInterproscan
PF16739CARD_2Caspase recruitment domainDomainInterproscan
PF04851ResIIIType III restriction enzyme, res subunitFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021673DomainRIG-I-like receptor, C-terminal regulatory domainInterproscan
IPR038557Homologous_superfamilyRIG-I-like receptor, C-terminal domain superfamilyInterproscan
IPR051363FamilyRIG-I-like Receptor (RLR) HelicaseInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR041204DomainRIG-I-like receptor, C-terminalInterproscan
IPR031964DomainCaspase recruitment domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR006935DomainHelicase/UvrB, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14074HELICASE WITH DEATH DOMAIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12646RIGI, DDX58; ATP-dependent RNA helicase DDX58EC:5.6.2.6
Pattern recognition receptorsko04054deepkoala

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