Detailed information of evm.model.Chr05.841 in Hemicorallium imperiale

Genomic Location: Chr05:15161780...15183740
NR annotation: XP_028391158.1, signal recognition particle subunit SRP72-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P33731Signal recognition particle subunit SRP72 OS=Canis lupus familiaris OX=9615 GN=SRP72 PE=1 SV=3
O76094Signal recognition particle subunit SRP72 OS=Homo sapiens OX=9606 GN=SRP72 PE=1 SV=3
P49965Signal recognition particle subunit SRP72 OS=Schistosoma mansoni OX=6183 GN=SRP72 PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19318DUF5918Family of unknown function (DUF5918)FamilyInterproscan
PF08492SRP72SRP72 RNA-binding domainDomainInterproscan
PF04564U-boxU-box domainDomainInterproscan
PF17004SRP_TPR_likePutative TPR-like repeatRepeatInterproscan
PF07648Kazal_2Kazal-type serine protease inhibitor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036058Homologous_superfamilyKazal domain superfamilyInterproscan
IPR002350DomainKazal domainInterproscan
IPR045696DomainRING finger protein 37, N-terminalInterproscan
IPR003613DomainU-box domainInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR039925DomainRNF37, RING-UboxInterproscan
IPR013699DomainSignal recognition particle, SRP72 subunit, RNA-bindingInterproscan
IPR031545RepeatSignal recognition particle subunit SRP72, TPR-like repeatInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR026270FamilySignal recognition particle, SRP72 subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14094SIGNAL RECOGNITION PARTICLE 72Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0006614Biological ProcessSRP-dependent cotranslational protein targeting to membraneInterproscan
GO:0008312Molecular Function7S RNA bindingInterproscan
GO:0048500Cellular Componentsignal recognition particleInterproscan
GO:0005786Cellular Componentsignal recognition particle, endoplasmic reticulum targetingInterproscan
GO:0043022Molecular Functionribosome bindingInterproscan

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