Detailed information of evm.model.Chr05.884 in Hemicorallium imperiale

Genomic Location: Chr05:15605001...15613572
NR annotation: XP_028390927.1, uncharacterized protein LOC114515810 isoform X1 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr05.884 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006394 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09038
all species →		53-BP1_TudorTumour suppressor p53-binding protein-1 TudorDomainInterproscan
PF18428
all species →		BRCT_3BRCA1 C Terminus (BRCT) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036420
all species →		Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR015125
all species →		DomainTumour suppressor p53-binding protein-1 Tudor domainInterproscan
IPR047252
all species →		FamilyTP53-binding protein 1-likeInterproscan
IPR047249
all species →		DomainTP53-binding protein 1-like, first BRCT domainInterproscan
IPR001357
all species →		DomainBRCT domainInterproscan
IPR014722
all species →		Homologous_superfamilyLarge ribosomal subunit protein uL2, domain 2Interproscan
IPR047250
all species →		DomainTP53-binding protein 1-like, second BRCT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15321
all species →		TUMOR SUPPRESSOR P53-BINDING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000077
all species →		Biological ProcessDNA damage checkpoint signalingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0042393
all species →		Molecular Functionhistone bindingInterproscan
GO:0045944
all species →		Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20915TP53BP1, P202; tumor suppressor p53-binding protein 1-NOD-like receptor signaling pathwayko04621deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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