Detailed information of evm.model.Chr05.886 in Hemicorallium imperiale

Genomic Location: Chr05:15620424...15653112
NR annotation: CAB3980322.1, sushi domain-containing 2-like [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr05.886 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
H9JIQ1Protein mesh OS=Bombyx mori OX=7091 PE=1 SV=1
Q9UGT4Sushi domain-containing protein 2 OS=Homo sapiens OX=9606 GN=SUSD2 PE=1 SV=1
Q8TER0Sushi, nidogen and EGF-like domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SNED1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000637 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00094
all species →		VWDvon Willebrand factor type D domainDomainInterproscan
PF01833
all species →		TIGIPT/TIG domainDomainInterproscan
PF06119
all species →		NIDONidogen-likeFamilyInterproscan
PF03782
all species →		AMOPAMOP domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR005533
all species →		DomainAMOP domainInterproscan
IPR001846
all species →		Domainvon Willebrand factor, type D domainInterproscan
IPR002909
all species →		DomainIPT domainInterproscan
IPR003886
all species →		DomainNIDO domainInterproscan
IPR051495
all species →		FamilyEpithelial Barrier and Cell Signaling ProteinInterproscan
IPR014756
all species →		Homologous_superfamilyImmunoglobulin E-setInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13802
all species →		MUCIN 4-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007160
all species →		Biological Processcell-matrix adhesionInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr05.886.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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