Gene detail

Detailed information of evm.model.Chr05.923 in Hemicorallium imperiale

Genomic Location: Chr05:16029111...16030639
NR annotation: CAB4019268.1, Transcription factor LBX1 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q804R0	Transcription factor LBX2 OS=Danio rerio OX=7955 GN=lbx2 PE=1 SV=1
Q2PYN8	Transcription factor LBX1 OS=Xenopus laevis OX=8355 GN=lbx1 PE=2 SV=1
Q0P4H6	Transcription factor LBX1 OS=Xenopus tropicalis OX=8364 GN=lbx1 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR051892	Family	LBX Family Transcription Factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24336	TRANSCRIPTION FACTOR LBX	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:1990837	Molecular Function	sequence-specific double-stranded DNA binding	Interproscan