Gene detail

Detailed information of evm.model.Chr05.926 in Hemicorallium imperiale

Genomic Location: Chr05:16121488...16123825
NR annotation: XP_028415076.1, homeobox protein MSH-D-like [Dendronephthya gigantea]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P35993	Homeobox protein XHOX-7.1' (Fragment) OS=Xenopus laevis OX=8355 PE=2 SV=1
A1YF16	Homeobox protein MSX-2 OS=Gorilla gorilla gorilla OX=9595 GN=MSX2 PE=3 SV=1
P35548	Homeobox protein MSX-2 OS=Homo sapiens OX=9606 GN=MSX2 PE=1 SV=3

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR050674	Family	Msh Homeobox Transcriptional Regulators	Interproscan
IPR020479	Domain	Homeobox domain, metazoa	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24338	HOMEOBOX PROTEIN MSX	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0048598	Biological Process	embryonic morphogenesis	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09341	MSX; homeobox protein MSX	-	Transcription factors	ko03000	deepkoala