Detailed information of evm.model.Chr05.995 in Hemicorallium imperiale

Genomic Location: Chr05:16944397...16953877
NR annotation: CAB3978540.1, endoplasmic reticulum-Golgi intermediate compartment 1 isoform X1 [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr05.995 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q969X5Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Homo sapiens OX=9606 GN=ERGIC1 PE=1 SV=1
Q9DC16Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Mus musculus OX=10090 GN=Ergic1 PE=1 SV=1
Q4V8Y6Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Danio rerio OX=7955 GN=ergic1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007353 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13850
all species →		ERGIC_NEndoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)DomainInterproscan
PF07970
all species →		COPIIcoated_ERVEndoplasmic reticulum vesicle transporter FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039542
all species →		DomainEndoplasmic reticulum vesicle transporter, N-terminalInterproscan
IPR045888
all species →		FamilyEndoplasmic reticulum vesicle transporterInterproscan
IPR012936
all species →		DomainEndoplasmic reticulum vesicle transporter, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10984
all species →		ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Chr05.995. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr05.995.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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