Detailed information of evm.model.Chr06.1008 in Hemicorallium imperiale

Genomic Location: Chr06:16917709...16949213
NR annotation: XP_028393058.1, neuronal PAS domain-containing protein 1-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr06.1008 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8IXF0Neuronal PAS domain-containing protein 3 OS=Homo sapiens OX=9606 GN=NPAS3 PE=1 SV=1
Q9QZQ0Neuronal PAS domain-containing protein 3 OS=Mus musculus OX=10090 GN=Npas3 PE=1 SV=1
Q99742Neuronal PAS domain-containing protein 1 OS=Homo sapiens OX=9606 GN=NPAS1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005333 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00989
all species →		PASPAS foldDomainInterproscan
PF08447
all species →		PAS_3PAS foldDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011598
all species →		DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR000014
all species →		DomainPAS domainInterproscan
IPR035965
all species →		Homologous_superfamilyPAS domain superfamilyInterproscan
IPR013767
all species →		DomainPAS foldInterproscan
IPR013655
all species →		DomainPAS fold-3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23043
all species →		HYPOXIA-INDUCIBLE FACTOR 1 ALPHAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000977
all species →		Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0046983
all species →		Molecular Functionprotein dimerization activityInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr06.1008.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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