Detailed information of evm.model.Chr06.1046 in Hemicorallium imperiale

Genomic Location: Chr06:17820334...17884400
NR annotation: XP_028392900.1, uncharacterized protein LOC114517402 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O70165Ficolin-1 OS=Mus musculus OX=10090 GN=Fcn1 PE=1 SV=1
D8VNS7Ryncolin-1 OS=Cerberus rynchops OX=46267 PE=1 SV=1
D8VNS8Ryncolin-2 OS=Cerberus rynchops OX=46267 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF15711ILEIInterleukin-like EMT inducerDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR000998DomainMAM domainInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR039477DomainILEI/PANDER domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR018378Conserved_siteC-type lectin, conserved siteInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR020837Conserved_siteFibrinogen, conserved siteInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

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