Detailed information of evm.model.Chr06.1051 in Hemicorallium imperiale

Genomic Location: Chr06:18019199...18044824
NR annotation: XP_028408922.1, cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9DBC3Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Mus musculus OX=10090 GN=Cmtr1 PE=1 SV=1
Q5U2Z5Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Cmtr1 PE=1 SV=1
A2VE39Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Bos taurus OX=9913 GN=CMTR1 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01728FtsJFtsJ-like methyltransferaseFamilyInterproscan
PF00397WWWW domainDomainInterproscan
PF01585G-patchG-patch domainFamilyInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050851FamilymRNA Cap 2'-O-Ribose MethyltransferaseInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR001202DomainWW domainInterproscan
IPR002877DomainRibosomal RNA methyltransferase, FtsJ domainInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR000467DomainG-patch domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR025816DomainRrmJ-type ribose 2-O-methyltransferase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16121UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004483Molecular FunctionmRNA (nucleoside-2'-O-)-methyltransferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006370Biological Process7-methylguanosine mRNA cappingInterproscan
GO:0097309Biological Processobsolete cap1 mRNA methylationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0032259Biological ProcessmethylationInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14589CMTR1, FTSJD2, MTR1; cap1 methyltransferaseEC:2.1.1.57
Messenger RNA biogenesisko03019deepkoala

TOP