Detailed information of evm.model.Chr06.1071 in Hemicorallium imperiale

Genomic Location: Chr06:18363346...18368361
NR annotation: CAB4014385.1, IST1 homolog isoform X1 [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr06.1071 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9CX00IST1 homolog OS=Mus musculus OX=10090 GN=Ist1 PE=1 SV=1
P53990IST1 homolog OS=Homo sapiens OX=9606 GN=IST1 PE=1 SV=1
Q568Z6IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005888 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03398
all species →		Ist1Regulator of Vps4 activity in the MVB pathwayFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042277
all species →		Homologous_superfamilyVacuolar protein sorting-associated protein IST1-likeInterproscan
IPR005061
all species →		FamilyVacuolar protein sorting-associated protein Ist1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12161
all species →		IST1 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0015031
all species →		Biological Processprotein transportInterproscan
GO:0008104
all species →		Biological Processprotein localizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr06.1071.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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