Detailed information of evm.model.Chr06.1126 in Hemicorallium imperiale

Genomic Location: Chr06:19016988...19052371
NR annotation: CAB4011211.1, galactosylgalactosylxylosyl 3-beta-glucuronosyltransferase I [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr06.1126 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P58158Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 OS=Mus musculus OX=10090 GN=B3gat3 PE=1 SV=1
Q9WU47Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 OS=Cricetulus griseus OX=10029 GN=B3GAT3 PE=2 SV=1
O94766Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 OS=Homo sapiens OX=9606 GN=B3GAT3 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001365 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13923
all species →		zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF21355
all species →		TRAF-mep_MATHTRAF/meprin, MATH domainDomainInterproscan
PF03360
all species →		Glyco_transf_43Glycosyltransferase family 43FamilyInterproscan
PF02176
all species →		zf-TRAFTRAF-type zinc fingerFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR029044
all species →		Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR005027
all species →		FamilyGlycosyl transferase, family 43Interproscan
IPR049342
all species →		DomainTRAF1-6/MEP1A/B-like, MATH domainInterproscan
IPR017907
all species →		Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR002083
all species →		DomainMATH/TRAF domainInterproscan
IPR001293
all species →		DomainZinc finger, TRAF-typeInterproscan
IPR008974
all species →		Homologous_superfamilyTRAF-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10896
all species →		GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000139
all species →		Cellular ComponentGolgi membraneInterproscan
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan
GO:0015018
all species →		Molecular Functiongalactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activityInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0050650
all species →		Biological Processchondroitin sulfate proteoglycan biosynthetic processInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr06.1126.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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