Detailed information of evm.model.Chr06.1134 in Hemicorallium imperiale

Genomic Location: Chr06:19169473...19190114
NR annotation: CAB3985563.1, Leucine-rich PPR motif-containing, mitochondrial [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr06.1134 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q28C74Leucine-rich PPR motif-containing protein, mitochondrial OS=Xenopus tropicalis OX=8364 GN=lrpprc PE=2 SV=1
P42704Leucine-rich PPR motif-containing protein, mitochondrial OS=Homo sapiens OX=9606 GN=LRPPRC PE=1 SV=3
Q6PB66Leucine-rich PPR motif-containing protein, mitochondrial OS=Mus musculus OX=10090 GN=Lrpprc PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004431 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17177
all species →		PPR_longPentacotripeptide-repeat region of PRORPRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR033443
all species →		DomainPentacotripeptide-repeat region of PRORPInterproscan
IPR002885
all species →		RepeatPentatricopeptide repeatInterproscan
IPR033490
all species →		FamilyLeucine-rich PPR motif-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46669
all species →		LEUCINE-RICH PPR MOTIF-CONTAINING PROTEIN, MITOCHONDRIALInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0003730
all species →		Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0070129
all species →		Biological Processregulation of mitochondrial translationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr06.1134.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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