Detailed information of evm.model.Chr06.1205 in Hemicorallium imperiale

Genomic Location: Chr06:20170584...20183455
NR annotation: XP_028392942.1, next to BRCA1 gene 1 protein-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q14596Next to BRCA1 gene 1 protein OS=Homo sapiens OX=9606 GN=NBR1 PE=1 SV=3
P97432Next to BRCA1 gene 1 protein OS=Mus musculus OX=10090 GN=Nbr1 PE=1 SV=1
Q501R9Next to BRCA1 gene 1 protein OS=Rattus norvegicus OX=10116 GN=Nbr1 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UFD|PB1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00569ZZZinc finger, ZZ typeDomainInterproscan
PF16158N_BRCA1_IGIg-like domain from next to BRCA1 geneDomainInterproscan
PF00564PB1PB1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015940DomainUbiquitin-associated domainInterproscan
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR000270DomainPB1 domainInterproscan
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan
IPR032350DomainNext to BRCA1, central domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20930OVARIAN CARCINOMA ANTIGEN CA125-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000407Cellular Componentphagophore assembly siteInterproscan
GO:0016236Biological ProcessmacroautophagyInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17987NBR1; next to BRCA1 gene 1 protein-Mitochondrial biogenesisko03029deepkoala

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