Detailed information of evm.model.Chr06.1336 in Hemicorallium imperiale

Genomic Location: Chr06:21243280...21247846
NR annotation: CAB4001940.1, 2, 3 -cyclic-nucleotide 3 -phosphodiesterase-like [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr06.1336 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008016 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05881
all species →		CNPase2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase)FamilyInterproscan
PF13671
all species →		AAA_33AAA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047325
all species →		DomainCyclic nucleotide phosphodiesterase, catalytic domainInterproscan
IPR008431
all species →		FamilyCyclic nucleotide phosphodiesteraseInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR009097
all species →		Homologous_superfamilyCyclic phosphodiesteraseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10156
all species →		2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004113
all species →		Molecular Function2',3'-cyclic-nucleotide 3'-phosphodiesterase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0009214
all species →		Biological Processcyclic nucleotide catabolic processInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr06.1336.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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