Detailed information of evm.model.Chr06.1380 in Hemicorallium imperiale

Genomic Location: Chr06:21684777...21711542
NR annotation: CAB3981571.1, signal-induced proliferation-associated 1 2 isoform X1 [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr06.1380 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q80TE4Signal-induced proliferation-associated 1-like protein 2 OS=Mus musculus OX=10090 GN=Sipa1l2 PE=1 SV=3
Q9P2F8Signal-induced proliferation-associated 1-like protein 2 OS=Homo sapiens OX=9606 GN=SIPA1L2 PE=1 SV=2
Q5JCS6Signal-induced proliferation-associated 1-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sipa1l2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002250 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21704
all species →
POLH-Rev1_HhHDNApol eta/Rev1, HhH motifMotifInterproscan
PF02145
all species →
Rap_GAPRap/ran-GAPFamilyInterproscan
PF18439
all species →
zf_UBZUbiquitin-Binding Zinc FingerDomainInterproscan
PF11799
all species →
IMS_CimpB/mucB/samB family C-terminal domainDomainInterproscan
PF00817
all species →
IMSimpB/mucB/samB familyFamilyInterproscan
PF00595
all species →
PDZPDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000331
all species →
DomainRap/Ran-GAP domainInterproscan
IPR001126
all species →
DomainUmuC domainInterproscan
IPR036775
all species →
Homologous_superfamilyDNA polymerase, Y-family, little finger domain superfamilyInterproscan
IPR043502
all species →
Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036034
all species →
Homologous_superfamilyPDZ superfamilyInterproscan
IPR050989
all species →
FamilyRap1/Ran GTPase-activatingInterproscan
IPR041298
all species →
DomainDNA polymerase eta, ubiquitin-binding zinc fingerInterproscan
IPR035974
all species →
Homologous_superfamilyRap/Ran-GAP superfamilyInterproscan
IPR001478
all species →
DomainPDZ domainInterproscan
IPR017961
all species →
DomainDNA polymerase, Y-family, little finger domainInterproscan
IPR043128
all species →
Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15711
all species →
RAP GTPASE-ACTIVATING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005096
all species →
Molecular FunctionGTPase activator activityInterproscan
GO:0051056
all species →
Biological Processregulation of small GTPase mediated signal transductionInterproscan
GO:0006281
all species →
Biological ProcessDNA repairInterproscan
GO:0003684
all species →
Molecular Functiondamaged DNA bindingInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0090630
all species →
Biological Processactivation of GTPase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr06.1380.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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