Detailed information of evm.model.Chr06.1406 in Hemicorallium imperiale

Genomic Location: Chr06:21955046...21966353
NR annotation: CAB3978971.1, homeobox MSX-1-like [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q05916Homeobox protein engrailed-1 OS=Gallus gallus OX=9031 GN=EN1 PE=3 SV=1
Q08820Homeobox protein Hox-D1 OS=Xenopus laevis OX=8355 GN=hoxd1 PE=2 SV=3
O42366Homeobox protein Hox-B1a OS=Danio rerio OX=7955 GN=hoxb1a PE=2 SV=2
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050674FamilyMsh Homeobox Transcriptional RegulatorsInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24338HOMEOBOX PROTEIN MSXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0048598Biological Processembryonic morphogenesisInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

TOP