Gene detail

Detailed information of evm.model.Chr06.1490 in Hemicorallium imperiale

Genomic Location: Chr06:23819181...23830407
NR annotation: CAB3976876.1, forkhead box N3-like isoform X1 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr06.1490 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3BJS3	Forkhead box protein N3 OS=Xenopus laevis OX=8355 GN=foxn3 PE=2 SV=1
Q28G71	Forkhead box protein N3 OS=Xenopus tropicalis OX=8364 GN=foxn3 PE=2 SV=1
Q33BP8	Forkhead box protein N3 OS=Sus scrofa OX=9823 GN=FOXN3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006764 (this species only)
Transcription factor family	Fork_head · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00250 all species →	Forkhead	Forkhead domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001766 all species →	Domain	Fork head domain	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR030456 all species →	Conserved_site	Fork head domain conserved site 2	Interproscan
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR047119 all species →	Family	Forkhead box protein N2/3-like	Interproscan
IPR047404 all species →	Domain	Forkhead box protein N3, forkhead domain	Interproscan
IPR018122 all species →	Conserved_site	Fork head domain conserved site1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13962 all species →	FORKHEAD BOX PROTEIN N3-LIKE PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0043565 all species →	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0000987 all species →	Molecular Function	cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09407	FOXN; forkhead box protein N	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.