Detailed information of evm.model.Chr06.993 in Hemicorallium imperiale

Genomic Location: Chr06:16702137...16711153
NR annotation: XP_028393116.1, la-related protein 7-like [Dendronephthya gigantea]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr06.993 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7ZWE3La-related protein 7 OS=Danio rerio OX=7955 GN=larp7 PE=2 SV=1
Q5XI01La-related protein 7 OS=Rattus norvegicus OX=10116 GN=Larp7 PE=1 SV=2
Q4R627La-related protein 7 OS=Macaca fascicularis OX=9541 GN=LARP7 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005516 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08777
all species →
RRM_3RNA binding motifDomainInterproscan
PF05383
all species →
LaLa domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014886
all species →
DomainLa protein, xRRM domainInterproscan
IPR006630
all species →
DomainLa-type HTH domainInterproscan
IPR036390
all species →
Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036388
all species →
Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR045180
all species →
FamilyLa domain containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22792
all species →
LUPUS LA PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr06.993.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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