Genomic Location: Chr07:24423040...24433413
NR annotation: CAB3997557.1, E3 ubiquitin- ligase pub2 [Paramuricea clavata]
| CDS |
| Transcript |
| Protein |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF17917 | RT_RNaseH | RNase H-like domain found in reverse transcriptase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR052055 | Family | Hepadnavirus polymerase/reverse transcriptase | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR003892 | Domain | Ubiquitin system component CUE | Interproscan |
| IPR011010 | Homologous_superfamily | DNA breaking-rejoining enzyme, catalytic core | Interproscan |
| IPR013762 | Homologous_superfamily | Integrase-like, catalytic domain superfamily | Interproscan |
| IPR035983 | Homologous_superfamily | HECT, E3 ligase catalytic domain | Interproscan |
| IPR041373 | Domain | Reverse transcriptase, RNase H-like domain | Interproscan |
| IPR000569 | Domain | HECT domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR33050 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0043130 | Molecular Function | ubiquitin binding | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0006310 | Biological Process | DNA recombination | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| GO:0004842 | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
