Detailed information of evm.model.Chr07.505 in Hemicorallium imperiale

Genomic Location: Chr07:11116116...11125811
NR annotation: CAB3985320.1, transcription activator BRG1-like isoform X1 [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr07.505 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8UVR5Bromodomain adjacent to zinc finger domain protein 1A (Fragment) OS=Xenopus laevis OX=8355 GN=baz1a PE=1 SV=1
O88379Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus OX=10090 GN=Baz1a PE=1 SV=3
Q8WZM0Histone acetyltransferase GCN5 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=GCN5 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007915 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00439
all species →
BromodomainBromodomainDomainInterproscan
PF01391
all species →
CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001487
all species →
DomainBromodomainInterproscan
IPR018359
all species →
Conserved_siteBromodomain, conserved siteInterproscan
IPR036427
all species →
Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR008160
all species →
RepeatCollagen triple helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45915
all species →
TRANSCRIPTION INTERMEDIARY FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0000790
all species →
Cellular ComponentchromatinInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr07.505.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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