Detailed information of evm.model.Chr07.587 in Hemicorallium imperiale

Genomic Location: Chr07:12225587...12227837
NR annotation: CAB4008220.1, ribosomal L27a [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr07.587 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P48160Large ribosomal subunit protein uL15 OS=Dictyostelium discoideum OX=44689 GN=rpl27a PE=3 SV=1
Q00454Large ribosomal subunit protein uL15 OS=Tetrahymena thermophila OX=5911 GN=RPL27A PE=1 SV=1
P47830Large ribosomal subunit protein uL15 OS=Xenopus laevis OX=8355 GN=rpl27a PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006093 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00828
all species →		Ribosomal_L27ARibosomal proteins 50S-L15, 50S-L18e, 60S-L27AFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036227
all species →		Homologous_superfamilyLarge ribosomal subunit protein uL15/eL18 superfamilyInterproscan
IPR001196
all species →		Conserved_siteLarge ribosomal subunit protein uL15, conserved siteInterproscan
IPR021131
all species →		DomainLarge ribosomal subunit protein uL15/eL18Interproscan
IPR030878
all species →		FamilyLarge ribosomal subunit protein uL15Interproscan
IPR027386
all species →		Homologous_superfamilyRibosomal uL15, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11721
all species →		60S RIBOSOMAL PROTEIN L27AInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0022625
all species →		Cellular Componentcytosolic large ribosomal subunitInterproscan
GO:0015934
all species →		Cellular Componentlarge ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02900RP-L27Ae, RPL27A; large subunit ribosomal protein L27Ae-Ribosomeko03011deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP