Detailed information of evm.model.Chr08.129 in Hemicorallium imperiale

Genomic Location: Chr08:3875097...3884947
NR annotation: XP_028393588.1, uncharacterized protein LOC114517934 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr08.129 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008411 (this species only) · gene tree & orthology
Transcription factor familyHomeobox · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046
all species →		HomeodomainHomeodomainDomainInterproscan
PF16557
all species →		CUTLCUT1-like DNA-binding domain of SATBDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356
all species →		DomainHomeobox domainInterproscan
IPR032355
all species →		DomainSATB, CUT1-like DNA-binding domainInterproscan
IPR039673
all species →		FamilyDNA-binding protein SATB1/SATB2Interproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR038216
all species →		Homologous_superfamilySATB, CUTL domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15116
all species →		DNA-BINDING PROTEIN SATB FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006338
all species →		Biological Processchromatin remodelingInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr08.129.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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