Gene detail

Detailed information of evm.model.Chr08.142 in Hemicorallium imperiale

Genomic Location: Chr08:4259242...4272413
NR annotation: XP_028394281.1, 28S ribosomal protein S22, mitochondrial-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr08.142 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P82650	Small ribosomal subunit protein mS22 OS=Homo sapiens OX=9606 GN=MRPS22 PE=1 SV=1
P82649	Small ribosomal subunit protein mS22 OS=Bos taurus OX=9913 GN=MRPS22 PE=1 SV=2
Q9CXW2	Small ribosomal subunit protein mS22 OS=Mus musculus OX=10090 GN=Mrps22 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006620 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10245 all species →	MRP-S22	Mitochondrial 28S ribosomal protein S22	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019374 all species →	Family	Small ribosomal subunit protein mS22	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13071 all species →	MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S22	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005763 all species →	Cellular Component	mitochondrial small ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17401	MRPS22; small subunit ribosomal protein S22	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.