Detailed information of evm.model.Chr08.250 in Hemicorallium imperiale

Genomic Location: Chr08:6882352...6961724
NR annotation: XP_028393942.1, apoptotic protease-activating factor 1-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q91736Ephrin type-B receptor 1-B (Fragment) OS=Xenopus laevis OX=8355 GN=ephb1-b PE=1 SV=1
Q03145Ephrin type-A receptor 2 OS=Mus musculus OX=10090 GN=Epha2 PE=1 SV=3
P54764Ephrin type-A receptor 4 OS=Homo sapiens OX=9606 GN=EPHA4 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07647SAM_2SAM domain (Sterile alpha motif)DomainInterproscan
PF17908APAF1_CAPAF-1 helical domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00619CARDCaspase recruitment domainDomainInterproscan
PF21296APAF-1-like_WHDApoptotic protease-activating factor 1-like, winged-helix domainDomainInterproscan
PF07714PK_Tyr_Ser-ThrProtein tyrosine and serine/threonine kinaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001660DomainSterile alpha motif domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR001315DomainCARD domainInterproscan
IPR008266Active_siteTyrosine-protein kinase, active siteInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR041452DomainAPAF-1 helical domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR020635DomainTyrosine-protein kinase, catalytic domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR001245DomainSerine-threonine/tyrosine-protein kinase, catalytic domainInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR050449FamilyEphrin receptor tyrosine kinasesInterproscan
IPR048975DomainApoptotic protease-activating factor 1, winged-helix domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46877EPH RECEPTOR A5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0004713Molecular Functionprotein tyrosine kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan

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