Gene detail

Detailed information of evm.model.Chr08.258 in Hemicorallium imperiale

Genomic Location: Chr08:7215907...7356346
NR annotation: XP_028404417.1, mucin-2-like [Dendronephthya gigantea]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q2PC93	SCO-spondin OS=Gallus gallus OX=9031 GN=SSPO PE=2 SV=1
Q28295	von Willebrand factor OS=Canis lupus familiaris OX=9615 GN=VWF PE=1 SV=2
Q62635	Mucin-2 (Fragment) OS=Rattus norvegicus OX=10116 GN=Muc2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00094	VWD	von Willebrand factor type D domain	Domain	Interproscan
PF01826	TIL	Trypsin Inhibitor like cysteine rich domain	Domain	Interproscan
PF00057	Ldl_recept_a	Low-density lipoprotein receptor domain class A	Repeat	Interproscan
PF08742	C8	C8 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001007	Domain	VWFC domain	Interproscan
IPR036084	Homologous_superfamily	Serine protease inhibitor-like superfamily	Interproscan
IPR001846	Domain	von Willebrand factor, type D domain	Interproscan
IPR036055	Homologous_superfamily	LDL receptor-like superfamily	Interproscan
IPR050780	Family	Mucin/von Willebrand/Thrombospondin superfamily	Interproscan
IPR002919	Domain	Trypsin Inhibitor-like, cysteine rich domain	Interproscan
IPR002172	Repeat	Low-density lipoprotein (LDL) receptor class A repeat	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR014853	Domain	VWF/SSPO/Zonadhesin-like, cysteine-rich domain	Interproscan
IPR023415	Conserved_site	Low-density lipoprotein (LDL) receptor class A, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11339	EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan