Detailed information of evm.model.Chr08.288 in Hemicorallium imperiale

Genomic Location: Chr08:7783343...7816458
NR annotation: XP_028393759.1, lisH domain-containing protein ARMC9-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr08.288 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2KI89LisH domain-containing protein ARMC9 OS=Bos taurus OX=9913 GN=ARMC9 PE=2 SV=1
Q5R629LisH domain-containing protein ARMC9 OS=Pongo abelii OX=9601 GN=ARMC9 PE=2 SV=1
Q5U245LisH domain-containing protein ARMC9 OS=Xenopus laevis OX=8355 GN=armc9 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002572 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01564
all species →		Spermine_synthSpermine/spermidine synthase domainDomainInterproscan
PF17284
all species →		Spermine_synt_NSpermidine synthase tetramerisation domainDomainInterproscan
PF21050
all species →		ARMC9_ARMLisH domain-containing protein ARMC9, ARM repeatsRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001045
all species →		FamilySpermidine/spermine synthasesInterproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR035246
all species →		DomainSpermidine synthase, tetramerisation domainInterproscan
IPR037163
all species →		Homologous_superfamilySpermidine synthase, tetramerisation domain superfamilyInterproscan
IPR030374
all species →		DomainPolyamine biosynthesis domainInterproscan
IPR048959
all species →		DomainLisH domain-containing protein ARMC9, ARM repeat domainInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR040369
all species →		FamilyLisH domain-containing protein ARMC9Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14881
all species →		LISH DOMAIN-CONTAINING PROTEIN ARMC9Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0005814
all species →		Cellular ComponentcentrioleInterproscan
GO:0036064
all species →		Cellular Componentciliary basal bodyInterproscan
GO:0060271
all species →		Biological Processcilium assemblyInterproscan
GO:0097542
all species →		Cellular Componentciliary tipInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr08.288.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP