Genomic Location: Chr08:7896733...7931146
NR annotation: XP_028410277.1, endothelin-converting enzyme homolog isoform X2 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families
evm.model.Chr08.297 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q15427 | Splicing factor 3B subunit 4 OS=Homo sapiens OX=9606 GN=SF3B4 PE=1 SV=1 |
| Q8QZY9 | Splicing factor 3B subunit 4 OS=Mus musculus OX=10090 GN=Sf3b4 PE=1 SV=1 |
| Q6AYL5 | Splicing factor 3B subunit 4 OS=Rattus norvegicus OX=10116 GN=Sf3b4 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007077 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05649 all species → | Peptidase_M13_N | Peptidase family M13 | Family | Interproscan |
| PF00076 all species → | RRM_1 | RNA recognition motif | Domain | Interproscan |
| PF01431 all species → | Peptidase_M13 | Peptidase family M13 | Family | Interproscan |
| PF05368 all species → | NmrA | NmrA-like family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 all species → | Domain | RNA recognition motif domain | Interproscan |
| IPR034159 all species → | Domain | SF3B4, RNA recognition motif 2 | Interproscan |
| IPR008753 all species → | Domain | Peptidase M13, N-terminal domain | Interproscan |
| IPR024079 all species → | Homologous_superfamily | Metallopeptidase, catalytic domain superfamily | Interproscan |
| IPR000718 all species → | Family | Peptidase M13 | Interproscan |
| IPR018497 all species → | Domain | Peptidase M13, C-terminal domain | Interproscan |
| IPR012677 all species → | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR052084 all species → | Family | Spliceosome-associated SF3B4 subunit | Interproscan |
| IPR042089 all species → | Homologous_superfamily | Peptidase M13, domain 2 | Interproscan |
| IPR008030 all species → | Domain | NmrA-like domain | Interproscan |
| IPR035979 all species → | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR036291 all species → | Homologous_superfamily | NAD(P)-binding domain superfamily | Interproscan |
| IPR034158 all species → | Domain | SF3B4, RNA recognition motif 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48030 all species → | SPLICING FACTOR 3B SUBUNIT 4 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0006508 all species → | Biological Process | proteolysis | Interproscan |
| GO:0008237 all species → | Molecular Function | metallopeptidase activity | Interproscan |
| GO:0004222 all species → | Molecular Function | metalloendopeptidase activity | Interproscan |
| GO:0005686 all species → | Cellular Component | U2 snRNP | Interproscan |
| GO:0005689 all species → | Cellular Component | U12-type spliceosomal complex | Interproscan |
| GO:0005730 all species → | Cellular Component | nucleolus | Interproscan |
| GO:0048026 all species → | Biological Process | positive regulation of mRNA splicing, via spliceosome | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
evm.model.Chr08.297.
