Detailed information of evm.model.Chr08.353 in Hemicorallium imperiale

Genomic Location: Chr08:8617877...8619108
NR annotation: XP_028394368.1, LOW QUALITY PROTEIN: trithorax group protein osa-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr08.353 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5M7M7Double-stranded RNA-binding protein Staufen homolog 2 OS=Xenopus tropicalis OX=8364 GN=stau2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002818 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00035
all species →
dsrmDouble-stranded RNA binding motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014720
all species →
DomainDouble-stranded RNA-binding domainInterproscan
IPR051247
all species →
FamilyRISC Loading Complex ComponentInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46205
all species →
LOQUACIOUS, ISOFORM BInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003725
all species →
Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0016442
all species →
Cellular ComponentRISC complexInterproscan
GO:0030422
all species →
Biological ProcesssiRNA processingInterproscan
GO:0035197
all species →
Molecular FunctionsiRNA bindingInterproscan
GO:0070578
all species →
Cellular ComponentRISC-loading complexInterproscan
GO:0070920
all species →
Biological Processregulation of regulatory ncRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr08.353.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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