Detailed information of evm.model.Chr08.448 in Hemicorallium imperiale

Genomic Location: Chr08:9941048...9962851
NR annotation: XP_028393539.1, nucleoporin NUP188 homolog isoform X1 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr08.448 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5SRE5Nucleoporin NUP188 OS=Homo sapiens OX=9606 GN=NUP188 PE=1 SV=1
Q6ZQH8Nucleoporin NUP188 OS=Mus musculus OX=10090 GN=Nup188 PE=1 SV=2
F6WXT2Nucleoporin NUP188 OS=Xenopus tropicalis OX=8364 GN=nup188 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002935 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.Chr08.448. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR044840
all species →		FamilyNucleoporin Nup188Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31431
all species →		NUCLEOPORIN NUP188 HOMOLOGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006405
all species →		Biological ProcessRNA export from nucleusInterproscan
GO:0006606
all species →		Biological Processprotein import into nucleusInterproscan
GO:0017056
all species →		Molecular Functionstructural constituent of nuclear poreInterproscan
GO:0044611
all species →		Cellular Componentnuclear pore inner ringInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr08.448.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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