Detailed information of evm.model.Chr08.552 in Hemicorallium imperiale

Genomic Location: Chr08:11520563...11577184
NR annotation: XP_028394111.1, matrilysin-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O77656Collagenase 3 OS=Bos taurus OX=9913 GN=MMP13 PE=2 SV=1
P45452Collagenase 3 OS=Homo sapiens OX=9606 GN=MMP13 PE=1 SV=1
P21692Interstitial collagenase OS=Sus scrofa OX=9823 GN=MMP1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00413Peptidase_M10MatrixinDomainInterproscan
PF01471PG_binding_1Putative peptidoglycan binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR002477DomainPeptidoglycan binding-likeInterproscan
IPR033739DomainPeptidase M10A, catalytic domainInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24039FIBRILLIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan

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