Detailed information of evm.model.Chr08.557 in Hemicorallium imperiale

Genomic Location: Chr08:11694413...11732582
NR annotation: CAB3988813.1, dystrobrevin beta isoform X5 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr08.557 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O70585Dystrobrevin beta OS=Mus musculus OX=10090 GN=Dtnb PE=1 SV=3
P84060Dystrobrevin beta OS=Rattus norvegicus OX=10116 GN=Dtnb PE=1 SV=2
Q9Y4J8Dystrobrevin alpha OS=Homo sapiens OX=9606 GN=DTNA PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001922 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00569
all species →		ZZZinc finger, ZZ typeDomainInterproscan
PF09068
all species →		EF-hand_2EF handDomainInterproscan
PF09069
all species →		EF-hand_3EF-handDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000433
all species →		DomainZinc finger, ZZ-typeInterproscan
IPR043145
all species →		Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan
IPR015153
all species →		DomainEF-hand domain, type 1Interproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan
IPR015154
all species →		DomainEF-hand domain, type 2Interproscan
IPR050774
all species →		FamilyKCMF1 and DystrophinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12268
all species →		E3 UBIQUITIN-PROTEIN LIGASE KCMF1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0045202
all species →		Cellular ComponentsynapseInterproscan
GO:0099536
all species →		Biological Processsynaptic signalingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr08.557.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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