Detailed information of evm.model.Chr08.616 in Hemicorallium imperiale

Genomic Location: Chr08:12626299...12638443
NR annotation: XP_032237398.1, E3 ubiquitin-protein ligase MARCHF8 [Nematostella vectensis]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr08.616 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001153 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12906
all species →		RINGvRING-variant domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR011016
all species →		DomainZinc finger, RING-CH-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46065
all species →		E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr08.616.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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