Gene detail

Detailed information of evm.model.Chr09.1016 in Hemicorallium imperiale

Genomic Location: Chr09:19287204...19296671
NR annotation: CAB3976592.1, RNA-binding 25 isoform X2 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
B2RY56	RNA-binding protein 25 OS=Mus musculus OX=10090 GN=Rbm25 PE=1 SV=2
P49756	RNA-binding protein 25 OS=Homo sapiens OX=9606 GN=RBM25 PE=1 SV=3
Q8VY15	RNA-binding motif protein 25 OS=Arabidopsis thaliana OX=3702 GN=RBM25 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01480	PWI	PWI domain	Family	Interproscan
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR002483	Domain	PWI domain	Interproscan
IPR034268	Domain	RBM25, RNA recognition motif	Interproscan
IPR052768	Family	Pre-mRNA_splicing_regulatory_protein	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18806	RBM25 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0000381	Biological Process	regulation of alternative mRNA splicing, via spliceosome	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005681	Cellular Component	spliceosomal complex	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12822	RBM25, S164; RNA-binding protein 25	-	Spliceosome	ko03041	deepkoala