Gene detail

Detailed information of evm.model.Chr09.1132 in Hemicorallium imperiale

Genomic Location: Chr09:20185407...20188032
NR annotation: CAB3985886.1, DNA repair RAD51 homolog 1 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q06609	DNA repair protein RAD51 homolog 1 OS=Homo sapiens OX=9606 GN=RAD51 PE=1 SV=1
P70099	DNA repair protein RAD51 homolog 1 OS=Cricetulus griseus OX=10029 GN=RAD51 PE=2 SV=1
Q2KJ94	DNA repair protein RAD51 homolog 1 OS=Bos taurus OX=9913 GN=RAD51 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08423	Rad51	Rad51	Domain	Interproscan
PF14520	HHH_5	Helix-hairpin-helix domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR020587	Domain	DNA recombination and repair protein RecA, monomer-monomer interface	Interproscan
IPR013632	Domain	DNA recombination and repair protein Rad51-like, C-terminal	Interproscan
IPR010995	Homologous_superfamily	DNA repair Rad51/transcription factor NusA, alpha-helical	Interproscan
IPR020588	Domain	DNA recombination and repair protein RecA-like, ATP-binding domain	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR016467	Family	DNA recombination and repair protein, RecA-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22942	RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006259	Biological Process	DNA metabolic process	Interproscan
GO:0008094	Molecular Function	ATP-dependent activity, acting on DNA	Interproscan
GO:0000150	Molecular Function	DNA strand exchange activity	Interproscan
GO:0000730	Biological Process	DNA recombinase assembly	Interproscan
GO:0000794	Cellular Component	condensed nuclear chromosome	Interproscan
GO:0003690	Molecular Function	double-stranded DNA binding	Interproscan
GO:0003697	Molecular Function	single-stranded DNA binding	Interproscan
GO:0006312	Biological Process	mitotic recombination	Interproscan
GO:0007131	Biological Process	reciprocal meiotic recombination	Interproscan
GO:0042148	Biological Process	DNA strand invasion	Interproscan
GO:0070192	Biological Process	chromosome organization involved in meiotic cell cycle	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0140664	Molecular Function	ATP-dependent DNA damage sensor activity	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04482	RAD51; DNA repair protein RAD51	-	DNA repair and recombination proteins	ko03400	deepkoala