Gene detail

Detailed information of evm.model.Chr09.1172 in Hemicorallium imperiale

Genomic Location: Chr09:20579079...20587325
NR annotation: XP_028396046.1, UBX domain-containing protein 1-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr09.1172 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A6H7B1	Mitochondrial import receptor subunit TOM20 homolog OS=Bos taurus OX=9913 GN=TOMM20 PE=2 SV=1
Q15388	Mitochondrial import receptor subunit TOM20 homolog OS=Homo sapiens OX=9606 GN=TOMM20 PE=1 SV=1
Q5RA31	Mitochondrial import receptor subunit TOM20 homolog OS=Pongo abelii OX=9601 GN=TOMM20 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006947 (this species only)
Ubiquitin family	ULD\|UFD\|UBX · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00789 all species →	UBX	UBX domain	Domain	Interproscan
PF02064 all species →	MAS20	MAS20 protein import receptor	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009060 all species →	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR001012 all species →	Domain	UBX domain	Interproscan
IPR002056 all species →	Family	Protein import receptor MAS20	Interproscan
IPR022422 all species →	Family	Protein import receptor MAS20, metazoan	Interproscan
IPR023392 all species →	Homologous_superfamily	Mitochondrial outer membrane translocase complex, Tom20 domain superfamily	Interproscan
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46340 all species →	UBX DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005742 all species →	Cellular Component	mitochondrial outer membrane translocase complex	Interproscan
GO:0006605 all species →	Biological Process	protein targeting	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0031397 all species →	Biological Process	negative regulation of protein ubiquitination	Interproscan
GO:0032435 all species →	Biological Process	negative regulation of proteasomal ubiquitin-dependent protein catabolic process	Interproscan
GO:0036435 all species →	Molecular Function	K48-linked polyubiquitin modification-dependent protein binding	Interproscan
GO:1903094 all species →	Biological Process	negative regulation of protein K48-linked deubiquitination	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24348	UBXN1_4; UBX domain-containing protein 1/4	-	Protein processing in endoplasmic reticulum	ko04141	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.